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DJ40_1205 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1205" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1205annotation not available (1995 aa)    
Predicted Functional Partners:
pbpC
PBP_1c- penicillin-binding protein 1C (787 aa)
 
  0.990
DJ40_3236
Conserved hypothetical protein (702 aa)
   
     
  0.580
DJ40_1204
Conserved hypothetical protein (54 aa)
              0.577
DJ40_3234
Protein of uncharacterised function (DUF3274) (703 aa)
   
     
  0.575
DJ40_2606
annotation not available (5813 aa)
 
     
  0.562
rcsC_2
annotation not available (514 aa)
 
          0.562
DJ40_3808
annotation not available (472 aa)
 
        0.553
DJ40_2961
annotation not available (600 aa)
 
 
  0.542
cvaA
annotation not available (430 aa)
 
        0.517
DJ40_1218
Membrane protein (735 aa)
 
          0.511
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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