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DJ40_1243 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1243" - Conserved hypothetical protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1243Conserved hypothetical protein (277 aa)    
Predicted Functional Partners:
DJ40_1241
annotation not available (154 aa)
 
        0.869
DJ40_1247
gtr1/RagA G conserved region family protein (251 aa)
 
        0.812
DJ40_1242
Conserved hypothetical protein (56 aa)
   
        0.801
DJ40_1239
Conserved hypothetical protein (73 aa)
 
        0.793
yeeU
annotation not available (124 aa)
 
        0.778
yeeV
annotation not available (122 aa)
 
          0.769
DJ40_3214
annotation not available (143 aa)
 
        0.750
ykfI
annotation not available (118 aa)
   
          0.709
yfjZ
annotation not available (110 aa)
   
        0.676
DJ40_1250
Conserved hypothetical protein (206 aa)
   
          0.672
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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