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DJ40_1314 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1314" - Conserved hypothetical protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1314Conserved hypothetical protein (124 aa)    
Predicted Functional Partners:
DJ40_1315
Conserved hypothetical protein (91 aa)
              0.845
DJ40_1313
Conserved hypothetical protein (64 aa)
              0.845
DJ40_1312
Conserved hypothetical protein (60 aa)
              0.845
DJ40_1311
annotation not available (65 aa)
              0.845
DJ40_1310
Conserved hypothetical protein (104 aa)
              0.845
DJ40_1309
Uncharacterized protein (112 aa)
              0.845
DJ40_1308
annotation not available (459 aa)
              0.845
DJ40_1316
Conserved hypothetical protein (112 aa)
              0.511
DJ40_1307
annotation not available (49 aa)
              0.457
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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