STRINGSTRING
DJ40_1354 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1354" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1354annotation not available (345 aa)    
Predicted Functional Partners:
rfbX
Putative O-antigen export protein; May be involved in the translocation process of the nascent O-polysaccharide molecules and/or its ligation to lipid A core units (437 aa)
 
   
  0.895
rfbE
annotation not available (145 aa)
 
 
  0.837
DJ40_1353
annotation not available (369 aa)
   
 
  0.804
ddhC
annotation not available (437 aa)
 
   
  0.601
rfaE
Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose; In the N-terminal section; belongs to the carbohydrate kinase PfkB family (476 aa)
   
   
  0.596
rfbF
G1P_cyt_trans- glucose-1-phosphate cytidylyltransferase (257 aa)
 
 
  0.586
DJ40_1351
annotation not available (362 aa)
 
 
  0.577
rfbG
CDP-D-glucose-4,6-dehydratase; CDP_4_6_dhtase- CDP-glucose 4,6-dehydratase (357 aa)
 
 
  0.561
DJ40_1352
annotation not available (361 aa)
              0.537
DJ40_1349
annotation not available (342 aa)
 
 
  0.527
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (19%) [HD]