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rfbG protein (Yersinia pseudotuberculosis) - STRING interaction network
"rfbG" - CDP-D-glucose-4,6-dehydratase in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
rfbGCDP-D-glucose-4,6-dehydratase; CDP_4_6_dhtase- CDP-glucose 4,6-dehydratase (357 aa)    
Predicted Functional Partners:
rfbF
G1P_cyt_trans- glucose-1-phosphate cytidylyltransferase (257 aa)
 
 
  0.999
ddhC
annotation not available (437 aa)
 
 
  0.998
ascD
annotation not available (329 aa)
 
 
  0.991
rfbJ
CDP-abequose synthase; The CDP-abequose synthase is involved in lipopolysaccharides (LPS) synthesis containing abequose which are important antigens of the cell surface responsible for the serological O specificity. Derivatives of the 3,6-dideoxyhexose group have a particular highly immunogenic character (283 aa)
 
     
  0.971
galF
galU- UTP-glucose-1-phosphate uridylyltransferase (297 aa)
       
  0.844
DJ40_661
galU- UTP-glucose-1-phosphate uridylyltransferase (296 aa)
       
  0.820
DJ40_1346
annotation not available (225 aa)
 
   
  0.753
rfbE
annotation not available (145 aa)
 
     
  0.722
arnB
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily (384 aa)
 
   
  0.631
ushA
annotation not available (345 aa)
           
  0.596
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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