STRINGSTRING
ascD protein (Yersinia pseudotuberculosis) - STRING interaction network
"ascD" - annotation not available in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ascDannotation not available (329 aa)    
Predicted Functional Partners:
rfbG
CDP-D-glucose-4,6-dehydratase; CDP_4_6_dhtase- CDP-glucose 4,6-dehydratase (357 aa)
 
 
  0.991
rfbJ
CDP-abequose synthase; The CDP-abequose synthase is involved in lipopolysaccharides (LPS) synthesis containing abequose which are important antigens of the cell surface responsible for the serological O specificity. Derivatives of the 3,6-dideoxyhexose group have a particular highly immunogenic character (283 aa)
 
 
  0.970
ddhC
annotation not available (437 aa)
 
   
  0.963
rfbF
G1P_cyt_trans- glucose-1-phosphate cytidylyltransferase (257 aa)
 
   
  0.848
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (180 aa)
   
 
  0.829
nifJ
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1177 aa)
         
  0.746
fdx
Fdx_isc- ferredoxin, 2Fe-2S type, ISC system (111 aa)
 
   
  0.727
hisE
Histidine biosynthesis bifunctional protein HisIE; histidine_hisI- phosphoribosyl-ATP diphosphatase; In the N-terminal section; belongs to the PRA-CH family (204 aa)
     
 
  0.676
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (336 aa)
   
 
  0.663
hcaA11
annotation not available (374 aa)
   
   
  0.639
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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