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rpmE2 protein (Yersinia pseudotuberculosis) - STRING interaction network
"rpmE2" - L31: ribosomal protein L31 in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmE2L31- ribosomal protein L31 (86 aa)    
Predicted Functional Partners:
DJ40_1377
rpmJ_bact- ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family (47 aa)
 
 
  0.966
rpmB
L28- ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family (78 aa)
 
 
  0.965
rpmI
rpmI_bact- ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family (65 aa)
 
 
  0.923
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (87 aa)
   
 
  0.903
rpsP
S16- ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family (82 aa)
   
 
  0.899
rpmG
rpmG_bact- ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family (55 aa)
 
 
  0.885
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
   
 
  0.882
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (115 aa)
   
 
  0.880
rpmA
L27- ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (85 aa)
   
 
  0.872
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (142 aa)
   
 
  0.872
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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