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DJ40_1405 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1405" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1405annotation not available (255 aa)    
Predicted Functional Partners:
abgR
annotation not available (286 aa)
   
          0.701
hdeB
Acid stress chaperone HdeB; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins (109 aa)
   
          0.664
yebF
annotation not available (136 aa)
   
          0.654
higA_1
annotation not available (107 aa)
   
          0.586
DJ40_87
annotation not available (798 aa)
   
          0.550
tps_1
annotation not available (806 aa)
   
          0.549
DJ40_3670
annotation not available (355 aa)
   
          0.545
DJ40_869
Protein of uncharacterised function (DUF1418) (104 aa)
   
          0.515
fepE
annotation not available (383 aa)
   
          0.508
rcsB_2
annotation not available (196 aa)
   
          0.493
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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