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ycgR protein (Yersinia pseudotuberculosis) - STRING interaction network
"ycgR" - Flagellar brake protein YcgR in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ycgRFlagellar brake protein YcgR; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (249 aa)    
Predicted Functional Partners:
cheA
annotation not available (718 aa)
   
   
  0.814
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (333 aa)
 
 
  0.804
yhjH
annotation not available (281 aa)
   
   
  0.799
DJ40_213
Protein of uncharacterised function (DUF1496) (96 aa)
   
   
  0.786
flgN1
annotation not available (145 aa)
 
        0.770
fliD
annotation not available (466 aa)
 
   
  0.730
fliS
fliS- flagellar protein FliS (132 aa)
 
   
  0.701
DJ40_2178
annotation not available (62 aa)
   
          0.694
DJ40_552
Anti-sigma-28 factor FlgM; flgM_jcvi- flagellar biosynthesis anti-sigma factor FlgM (100 aa)
 
   
  0.691
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (330 aa)
   
 
  0.651
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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