STRINGSTRING
frsA protein (Yersinia pseudotuberculosis) - STRING interaction network
"frsA" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frsAannotation not available (415 aa)    
Predicted Functional Partners:
crl
Sigma factor-binding protein Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32 (133 aa)
 
          0.857
yijD
annotation not available (135 aa)
   
          0.768
DJ40_1955
Protein of uncharacterised function (DUF1107) (70 aa)
   
          0.747
zapC
Cell division protein ZapC; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ (183 aa)
   
          0.669
DJ40_840
annotation not available (555 aa)
   
          0.666
DJ40_3474
UPF0325 protein ERS008480_01527; Belongs to the UPF0325 family (129 aa)
   
          0.659
yciN
annotation not available (83 aa)
   
          0.649
cyaA
annotation not available (850 aa)
   
     
  0.646
mlc
annotation not available (454 aa)
 
     
  0.627
arcB
annotation not available (778 aa)
 
 
  0.605
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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