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rscA protein (Yersinia pseudotuberculosis) - STRING interaction network
"rscA" - Adhesin in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rscAAdhesin; adhes_NPXG- filamentous hemagglutinin family N-terminal domain protein (1912 aa)    
Predicted Functional Partners:
hxuB
annotation not available (596 aa)
 
   
  0.974
yapE
Autotrans_barl- outer membrane autotransporter barrel domain protein (1070 aa)
   
     
  0.864
DJ40_1477
annotation not available (617 aa)
 
          0.859
tadG
annotation not available (518 aa)
 
     
  0.779
tps_1
annotation not available (806 aa)
   
          0.773
DJ40_698
annotation not available (786 aa)
   
          0.761
DJ40_1901
Phage-related protein (122 aa)
   
          0.760
DJ40_3056
annotation not available (288 aa)
   
          0.759
tadF
annotation not available (190 aa)
   
          0.730
DJ40_3053
Pilus assembly protein CpaE (375 aa)
   
          0.727
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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