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DJ40_1501 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1501" - DUF4089 domain-containing protein in Yersinia pseudotuberculosis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1501DUF4089 domain-containing protein (67 aa)    
Predicted Functional Partners:
gatA
Amidase; amido_AtzE- amidohydrolase, AtzE family protein (465 aa)
 
          0.965
DJ40_1503
Protein of uncharacterised function (DUF3225) (128 aa)
 
          0.871
ybbH_4
annotation not available (277 aa)
 
          0.795
DJ40_680
annotation not available (358 aa)
   
          0.600
DJ40_681
annotation not available (411 aa)
   
          0.595
fliY_3
annotation not available (262 aa)
 
          0.592
lamB_1
Maltoporin; Involved in the transport of maltose and maltodextrins; Belongs to the porin LamB (TC 1.B.3) family (419 aa)
   
          0.526
argE1
Allantoate amidohydrolase; Hydantase- amidase, hydantoinase/carbamoylase family protein (427 aa)
 
          0.519
pucG
annotation not available (435 aa)
 
          0.506
yecS_3
HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein (217 aa)
 
          0.491
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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