STRINGSTRING
emrR protein (Yersinia pseudotuberculosis) - STRING interaction network
"emrR" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrRannotation not available (170 aa)    
Predicted Functional Partners:
emrB
annotation not available (511 aa)
 
 
  0.778
emrA
8a0101- efflux pump membrane family protein (390 aa)
 
 
  0.695
ydgH
annotation not available (317 aa)
   
          0.623
DJ40_2341
Protein of uncharacterised function (DUF1454) (211 aa)
   
          0.619
DJ40_1403
Lipoprotein YajG (192 aa)
   
          0.601
DJ40_1651
annotation not available (115 aa)
   
          0.599
DJ40_1787
annotation not available (233 aa)
   
          0.589
DJ40_1506
annotation not available (113 aa)
   
   
  0.569
DJ40_868
annotation not available (161 aa)
   
          0.550
DJ40_1510
annotation not available (388 aa)
   
          0.518
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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