STRINGSTRING
emrB protein (Yersinia pseudotuberculosis) - STRING interaction network
"emrB" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrBannotation not available (511 aa)    
Predicted Functional Partners:
emrA
8a0101- efflux pump membrane family protein (390 aa)
 
 
  0.982
emrR
annotation not available (170 aa)
 
 
  0.778
alkA
annotation not available (203 aa)
           
  0.596
ratB
annotation not available (94 aa)
           
  0.596
spvB
annotation not available (1505 aa)
           
  0.592
pcm
Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins (208 aa)
     
   
  0.587
tolC
annotation not available (464 aa)
       
 
  0.506
aaeA
P-hydroxybenzoic acid efflux pump subunit AaeA; Forms an efflux pump with AaeB (311 aa)
 
 
  0.499
mdtK
Multidrug resistance protein MdtK; Multidrug efflux pump that functions probably as a Na(+)/drug antiporter (457 aa)
     
   
  0.483
sugE
annotation not available (104 aa)
           
  0.476
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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