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DJ40_1515 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1515" - Lipoprotein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1515Lipoprotein (113 aa)    
Predicted Functional Partners:
pssA
annotation not available (451 aa)
   
        0.747
DJ40_2202
Protein of uncharacterised function (DUF2500) (139 aa)
   
          0.561
ybjP
Putative lipoprotein (191 aa)
   
          0.555
DJ40_560
Putative periplasmic or exported protein (113 aa)
   
          0.528
chbR
annotation not available (276 aa)
   
 
      0.489
rlpA
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (360 aa)
           
  0.475
DJ40_3670
annotation not available (355 aa)
   
          0.467
DJ40_4082
Lipoprotein (129 aa)
   
          0.464
aaeX
Protein AaeX (67 aa)
   
          0.455
yfiQ
annotation not available (880 aa)
   
        0.453
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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