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DJ40_153 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_153" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_153annotation not available (71 aa)    
Predicted Functional Partners:
DJ40_485
Protein of uncharacterised function (DUF2594) (74 aa)
   
          0.735
yddG
annotation not available (295 aa)
 
            0.676
DJ40_4220
annotation not available (184 aa)
   
          0.630
dsrB
annotation not available (63 aa)
   
          0.629
DJ40_25
YjbD family (DUF3811) (87 aa)
   
          0.615
tomB
annotation not available (122 aa)
   
          0.600
DJ40_2204
annotation not available (208 aa)
   
          0.590
wzzE
ECA polysaccharide chain length modulation protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family (339 aa)
   
          0.589
uspB
annotation not available (111 aa)
   
        0.527
DJ40_4082
Lipoprotein (129 aa)
   
          0.521
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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