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DJ40_156 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_156" - Uncharacterized protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_156Uncharacterized protein (99 aa)    
Predicted Functional Partners:
DJ40_2231
annotation not available (66 aa)
   
          0.764
DJ40_4251
Conserved hypothetical protein (152 aa)
   
          0.754
DJ40_3537
annotation not available (110 aa)
   
          0.750
pilF
type_IV_pilW- type IV pilus biogenesis/stability protein PilW (249 aa)
   
          0.742
DJ40_3693
Enhanced serine sensitivity protein SseB; sseB N-terminal domain protein (317 aa)
   
          0.729
DJ40_2641
annotation not available (298 aa)
   
          0.723
DJ40_1017
annotation not available (367 aa)
   
          0.720
DJ40_3449
Prepilin peptidase dependent protein C (136 aa)
   
          0.711
thiK
Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate (268 aa)
   
          0.696
DJ40_3448
Membrane protein (156 aa)
   
          0.683
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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