STRINGSTRING
rbsB_6 protein (Yersinia pseudotuberculosis) - STRING interaction network
"rbsB_6" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsB_6annotation not available (313 aa)    
Predicted Functional Partners:
rbsC_13
annotation not available (380 aa)
 
  0.985
rbsC3
annotation not available (353 aa)
 
  0.961
mglA_4
ccmA- heme ABC exporter, ATP-binding protein CcmA (507 aa)
 
  0.957
DJ40_1560
Putative lipoprotein (205 aa)
 
          0.906
rbsA3
ccmA- heme ABC exporter, ATP-binding protein CcmA (512 aa)
 
  0.895
rbsB3
annotation not available (323 aa)
   
   
 
0.813
DJ40_99
Putative lipoprotein (217 aa)
 
          0.747
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose (139 aa)
 
   
  0.635
DJ40_1554
L-fucose isomerase, C-terminal domain protein (474 aa)
 
          0.634
DJ40_1556
Transketolase, C-terminal domain protein (314 aa)
 
        0.584
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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