STRINGSTRING
glcR_3 protein (Yersinia pseudotuberculosis) - STRING interaction network
"glcR_3" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcR_3annotation not available (269 aa)    
Predicted Functional Partners:
lsrB_3
annotation not available (334 aa)
 
          0.594
DJ40_1822
PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase (858 aa)
 
   
  0.548
lsrD_2
annotation not available (345 aa)
 
          0.459
fruA
PTS system fructose-specific transporter subunit IIBC; FRU- PTS system, Fru family, IIB component domain protein (566 aa)
 
     
  0.456
rbsC_10
annotation not available (329 aa)
 
          0.445
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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