STRINGSTRING
pheC protein (Yersinia pseudotuberculosis) - STRING interaction network
"pheC" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pheCannotation not available (254 aa)    
Predicted Functional Partners:
pheA
annotation not available (385 aa)
   
 
  0.949
tyrA
annotation not available (373 aa)
     
 
  0.906
hisC
hisC- histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily (382 aa)
     
 
  0.904
pheA2
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate (186 aa)
     
 
  0.902
aspC
annotation not available (396 aa)
         
    0.900
tyrB
annotation not available (397 aa)
         
    0.900
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (737 aa)
         
    0.800
ddc_1
annotation not available (471 aa)
         
    0.800
ccp
annotation not available (459 aa)
   
        0.647
gltL
annotation not available (241 aa)
 
 
  0.550
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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