STRINGSTRING
leuO protein (Yersinia pseudotuberculosis) - STRING interaction network
"leuO" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
leuOannotation not available (318 aa)    
Predicted Functional Partners:
lysR
annotation not available (313 aa)
           
  0.613
qseE
annotation not available (475 aa)
           
  0.592
typA
Translational GTPase TypA; typA_BipA- GTP-binding protein TypA/BipA (607 aa)
           
  0.583
feoC
Probable [Fe-S]-dependent transcriptional repressor; May function as a transcriptional regulator that controls feoABC expression (85 aa)
   
          0.525
chbR
annotation not available (276 aa)
   
   
  0.484
ompR
annotation not available (239 aa)
   
 
  0.466
kstR2
annotation not available (236 aa)
   
 
      0.427
DJ40_1825
annotation not available (291 aa)
   
        0.421
rpoS
rpoS_proteo- RNA polymerase sigma factor RpoS (332 aa)
           
  0.410
sspA
Glutathione S-transferase, N-terminal domain protein; Belongs to the GST superfamily (213 aa)
           
  0.404
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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