STRINGSTRING
arcA protein (Yersinia pseudotuberculosis) - STRING interaction network
"arcA" - Two-component system response regulator ArcA in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcATwo-component system response regulator ArcA; Transcriptional regulatory , C terminal family protein (238 aa)    
Predicted Functional Partners:
arcB
annotation not available (778 aa)
0.953
barA
annotation not available (939 aa)
 
  0.892
torS
annotation not available (939 aa)
 
  0.827
DJ40_2587
annotation not available (851 aa)
   
 
  0.720
cheA
annotation not available (718 aa)
 
 
  0.703
cpxR
annotation not available (232 aa)
   
 
0.662
rapA
RNA polymerase-associated protein RapA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair (968 aa)
   
 
 
  0.658
phoR
phoR_proteo- phosphate regulon sensor kinase PhoR (438 aa)
 
  0.658
envZ
annotation not available (450 aa)
 
 
  0.611
tolC
annotation not available (464 aa)
     
 
  0.606
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (16%) [HD]