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DJ40_1787 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1787" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1787annotation not available (233 aa)    
Predicted Functional Partners:
DJ40_1403
Lipoprotein YajG (192 aa)
   
        0.778
lplA
Lipoate-protein ligase A; Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes; Belongs to the LplA family (338 aa)
 
        0.778
DJ40_2341
Protein of uncharacterised function (DUF1454) (211 aa)
   
          0.777
DJ40_2392
annotation not available (569 aa)
   
          0.751
igaA
annotation not available (715 aa)
   
          0.744
yfeY
RpoE-regulated lipoprotein (203 aa)
   
          0.734
helD
annotation not available (684 aa)
   
          0.724
ydgH
annotation not available (317 aa)
   
          0.723
DJ40_926
annotation not available (114 aa)
   
          0.717
holE
annotation not available (76 aa)
   
          0.717
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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