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DJ40_1811 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1811" - annotation not available in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1811annotation not available (410 aa)    
Predicted Functional Partners:
rfaQ
Lipopolysaccharide biosynthesis protein; heptsyl_trn_III- putative lipopolysaccharide heptosyltransferase III (387 aa)
 
   
  0.803
DJ40_2185
Alpha-related fimbriae chaperone 1; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein (228 aa)
   
          0.777
DJ40_2184
Alpha-related fimbriae usher protein (777 aa)
   
          0.766
DJ40_1188
annotation not available (321 aa)
 
          0.747
tps_1
annotation not available (806 aa)
 
          0.695
DJ40_87
annotation not available (798 aa)
   
          0.679
DJ40_3053
Pilus assembly protein CpaE (375 aa)
   
          0.678
rcsB_2
annotation not available (196 aa)
   
          0.664
epaO
spaO_YscQ- type III secretion apparatus protein, YscQ/HrcQ family (320 aa)
 
          0.659
rfaE
Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose; In the N-terminal section; belongs to the carbohydrate kinase PfkB family (476 aa)
         
  0.652
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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