STRINGSTRING
lsrD_1 protein (Yersinia pseudotuberculosis) - STRING interaction network
"lsrD_1" - annotation not available in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lsrD_1annotation not available (333 aa)    
Predicted Functional Partners:
lsrB
annotation not available (339 aa)
 
  0.997
mglA9
ccmA- heme ABC exporter, ATP-binding protein CcmA (527 aa)
 
  0.997
lsrC
annotation not available (351 aa)
 
 
0.991
lsrF
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase; Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the transfer of an acetyl moiety from 3-hydroxy-5-phosphonooxypentane-2,4-dione to CoA to form glycerone phosphate and acetyl-CoA; Belongs to the DeoC/FbaB aldolase family (291 aa)
 
   
  0.951
lsrG
(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase; Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the conversion of (4S)-4-hydroxy-5- phosphonooxypentane-2,3-dione (P-DPD) to 3-hydroxy-5- phosphonooxypentane-2,4-dione (P-HPD); Belongs to the LsrG family (96 aa)
 
   
  0.931
lsrK
Autoinducer-2 kinase; Catalyzes the phosphorylation of autoinducer-2 (AI-2) to phospho-AI-2, which subsequently inactivates the transcriptional regulator LsrR and leads to the transcription of the lsr operon. Phosphorylates the ring-open form of (S)-4,5-dihydroxypentane-2,3- dione (DPD), which is the precursor to all AI-2 signaling molecules, at the C5 position (530 aa)
 
   
  0.919
lsrR
annotation not available (331 aa)
 
   
  0.845
rbsB13
annotation not available (329 aa)
   
  0.627
lsrB_1
annotation not available (331 aa)
   
  0.625
lsrB_3
annotation not available (334 aa)
   
  0.613
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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