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DJ40_1825 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1825" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1825annotation not available (291 aa)    
Predicted Functional Partners:
DJ40_1827
Uncharacterized protein (178 aa)
              0.845
DJ40_1822
PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase (858 aa)
   
 
 
  0.613
araC8
annotation not available (288 aa)
 
 
 
  0.472
leuO
annotation not available (318 aa)
   
        0.421
lysR8
annotation not available (292 aa)
   
   
  0.418
chbR
annotation not available (276 aa)
 
 
 
  0.401
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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