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DJ40_1838 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1838" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1838annotation not available (200 aa)    
Predicted Functional Partners:
DJ40_1837
Conserved hypothetical protein (70 aa)
              0.753
rcsC_2
annotation not available (514 aa)
   
          0.742
DJ40_3808
annotation not available (472 aa)
   
          0.709
DJ40_1839
Uncharacterized protein (157 aa)
              0.676
DJ40_1841
annotation not available (457 aa)
              0.662
DJ40_1840
Uncharacterized protein (176 aa)
              0.662
DJ40_4131
annotation not available (534 aa)
 
        0.649
DJ40_3630
Uncharacterized protein; Putative k06909 (538 aa)
 
        0.642
hicB
annotation not available (135 aa)
   
     
  0.642
DJ40_3891
Membrane protein (679 aa)
   
          0.635
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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