STRINGSTRING
ycjP_1 protein (Yersinia pseudotuberculosis) - STRING interaction network
"ycjP_1" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycjP_1annotation not available (279 aa)    
Predicted Functional Partners:
ugpC_4
annotation not available (364 aa)
      0.968
ugpA_2
annotation not available (294 aa)
 
  0.964
DJ40_1882
annotation not available (388 aa)
 
          0.862
ycjO_1
annotation not available (296 aa)
 
  0.825
ugpA_3
annotation not available (293 aa)
 
  0.823
ycjO_3
annotation not available (286 aa)
 
  0.820
ycjO_2
annotation not available (291 aa)
 
  0.817
ugpC_5
annotation not available (371 aa)
      0.803
ugpC_3
annotation not available (375 aa)
      0.800
ugpA_1
annotation not available (294 aa)
 
  0.786
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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