STRINGSTRING
DJ40_1889 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1889" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1889annotation not available (672 aa)    
Predicted Functional Partners:
DJ40_1888
annotation not available (407 aa)
 
          0.940
DJ40_1882
annotation not available (388 aa)
   
          0.750
mdtE_2
RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (360 aa)
   
          0.646
DJ40_2048
Pili and flagellar-assembly chaperone, PapD N-terminal domain protein (247 aa)
   
          0.644
DJ40_2184
Alpha-related fimbriae usher protein (777 aa)
   
          0.636
icsA_3
Autotrans_barl- outer membrane autotransporter barrel domain protein (3709 aa)
   
          0.608
DJ40_2050
Conserved hypothetical protein (212 aa)
   
          0.606
DJ40_2642
annotation not available (201 aa)
   
          0.577
DJ40_1291
Conserved hypothetical protein (648 aa)
   
          0.532
DJ40_369
annotation not available (103 aa)
   
          0.493
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (14%) [HD]