STRINGSTRING
DJ40_1892 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1892" - Putative lipid carrier protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1892Putative lipid carrier protein (173 aa)    
Predicted Functional Partners:
DJ40_1891
annotation not available (166 aa)
 
      0.968
yhbU_2
Putative protease (331 aa)
 
 
  0.927
DJ40_1894
annotation not available (292 aa)
 
 
  0.918
yaeP
UPF0253 protein ERS008480_03643; Belongs to the UPF0253 family (66 aa)
   
        0.584
DJ40_4086
UPF0227 protein ERS008480_04429; Belongs to the UPF0227 family (180 aa)
   
        0.525
yfbU
UPF0304 protein ERS008480_02202; Belongs to the UPF0304 family (164 aa)
   
        0.522
yhbU_1
annotation not available (464 aa)
 
 
  0.510
yciN
annotation not available (83 aa)
   
          0.484
yihD
annotation not available (89 aa)
   
        0.483
narX
annotation not available (593 aa)
 
          0.415
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (10%) [HD]