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oprM protein (Yersinia pseudotuberculosis) - STRING interaction network
"oprM" - outer_NodT: efflux transporter, outer membrane factor in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprMouter_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (468 aa)    
Predicted Functional Partners:
ttgA
Multidrug efflux protein; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (376 aa)
 
  0.997
acrB_1
2A0602- RND transporter, hydrophobe/amphiphile efflux-1 family protein (1041 aa)
  0.997
acrB
annotation not available (1050 aa)
  0.982
acrA
annotation not available (395 aa)
 
  0.981
acrD
2A0602- RND transporter, hydrophobe/amphiphile efflux-1 family protein (1043 aa)
 
  0.906
macB_5
annotation not available (669 aa)
 
 
  0.829
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (649 aa)
 
 
  0.823
tolC
annotation not available (464 aa)
         
0.820
bepG
annotation not available (1039 aa)
 
  0.807
bepF
HlyD family drug efflux protein; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (436 aa)
 
 
  0.802
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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