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DJ40_2048 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2048" - Pili and flagellar-assembly chaperone, PapD N-terminal domain protein in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2048Pili and flagellar-assembly chaperone, PapD N-terminal domain protein (247 aa)    
Predicted Functional Partners:
htrE_3
Putative outer membrane fimbrial usher protein; papC N-terminal domain protein (792 aa)
 
      0.925
DJ40_2050
Conserved hypothetical protein (212 aa)
 
      0.876
DJ40_2184
Alpha-related fimbriae usher protein (777 aa)
   
      0.792
DJ40_398
annotation not available (425 aa)
   
      0.730
rcsB_2
annotation not available (196 aa)
   
          0.710
DJ40_2185
Alpha-related fimbriae chaperone 1; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein (228 aa)
   
          0.678
pgaD
Hemin storage system protein; PGA_PgaD- poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD (155 aa)
   
          0.662
DJ40_3071
Uncharacterized protein conserved in bacteria, putative lipoprotein (331 aa)
   
        0.658
fim
annotation not available (176 aa)
   
      0.657
DJ40_1889
annotation not available (672 aa)
   
          0.644
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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