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DJ40_2050 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2050" - Conserved hypothetical protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2050Conserved hypothetical protein (212 aa)    
Predicted Functional Partners:
htrE_3
Putative outer membrane fimbrial usher protein; papC N-terminal domain protein (792 aa)
 
      0.887
DJ40_2048
Pili and flagellar-assembly chaperone, PapD N-terminal domain protein (247 aa)
 
      0.876
DJ40_2184
Alpha-related fimbriae usher protein (777 aa)
   
      0.789
icsA_3
Autotrans_barl- outer membrane autotransporter barrel domain protein (3709 aa)
   
 
  0.742
rcsB_2
annotation not available (196 aa)
   
 
      0.717
DJ40_2185
Alpha-related fimbriae chaperone 1; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein (228 aa)
   
      0.714
epaO
spaO_YscQ- type III secretion apparatus protein, YscQ/HrcQ family (320 aa)
   
          0.701
tps_1
annotation not available (806 aa)
   
          0.698
DJ40_3071
Uncharacterized protein conserved in bacteria, putative lipoprotein (331 aa)
   
        0.693
DJ40_398
annotation not available (425 aa)
   
          0.686
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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