STRINGSTRING
yscN protein (Yersinia pseudotuberculosis) - STRING interaction network
"yscN" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yscNannotation not available (445 aa)    
Predicted Functional Partners:
flhA1
Secretion system apparatus protein SsaV; hrcV- type III secretion , HrcV family protein (682 aa)
 
   
  0.980
flgJ
flagell_FlgJ- flagellar rod assembly protein/muramidase FlgJ (314 aa)
   
 
  0.975
DJ40_526
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (138 aa)
 
 
  0.966
escU
annotation not available (355 aa)
   
  0.961
DJ40_3074
flhB- flagellar biosynthetic protein FlhB (377 aa)
   
  0.943
DJ40_557
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin (386 aa)
   
  0.935
DJ40_2086
hrpE_YscL_not- type III secretion apparatus protein, HrpE/YscL family (215 aa)
   
 
  0.936
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (333 aa)
   
   
  0.913
DJ40_3078
fliN- flagellar motor switch protein FliN (137 aa)
 
 
  0.912
DJ40_3077
fliP- flagellar biosynthetic protein FliP (256 aa)
   
  0.900
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (9%) [HD]