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DJ40_2178 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2178" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2178annotation not available (62 aa)    
Predicted Functional Partners:
ycgR
Flagellar brake protein YcgR; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (249 aa)
   
          0.694
cdh
annotation not available (265 aa)
   
          0.648
DJ40_2182
annotation not available (439 aa)
 
 
  0.568
nagE
PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (677 aa)
       
 
  0.496
dcrB
annotation not available (175 aa)
   
          0.466
cycB
annotation not available (411 aa)
   
 
  0.461
malE
annotation not available (403 aa)
   
 
  0.461
ybiU
Protein of uncharacterised function (DUF1479) (415 aa)
   
          0.454
DJ40_799
Fructosamine-3-kinase (297 aa)
   
          0.453
flgN1
annotation not available (145 aa)
   
          0.453
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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