STRINGSTRING
ugpA_1 protein (Yersinia pseudotuberculosis) - STRING interaction network
"ugpA_1" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpA_1annotation not available (294 aa)    
Predicted Functional Partners:
ugpE
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane (281 aa)
  0.999
ugpC_2
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (307 aa)
  0.993
DJ40_2182
annotation not available (439 aa)
 
  0.986
malG_2
annotation not available (274 aa)
 
  0.851
ycjP_2
annotation not available (272 aa)
 
  0.847
ycjP_3
annotation not available (275 aa)
 
  0.790
ycjP_1
annotation not available (279 aa)
 
  0.786
ugpQ
annotation not available (249 aa)
 
   
  0.777
ugpC_5
annotation not available (371 aa)
 
  0.774
ugpC_4
annotation not available (364 aa)
 
  0.752
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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