STRINGSTRING
livK protein (Yersinia pseudotuberculosis) - STRING interaction network
"livK" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livKannotation not available (371 aa)    
Predicted Functional Partners:
livH
annotation not available (308 aa)
 
  0.998
livM
annotation not available (428 aa)
 
  0.996
livF
annotation not available (233 aa)
  0.990
livG
annotation not available (255 aa)
  0.990
gltB
annotation not available (1485 aa)
   
   
  0.653
urtB
urea_trans_UrtB- urea ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family (519 aa)
   
  0.643
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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