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DJ40_2201 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2201" - Predicted membrane protein in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2201Predicted membrane protein (90 aa)    
Predicted Functional Partners:
rsmD
Ribosomal RNA small subunit methyltransferase D; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle (220 aa)
              0.884
DJ40_3764
UPF0370 protein ERS008480_00263 (64 aa)
   
          0.778
rof
annotation not available (86 aa)
   
          0.777
DJ40_4220
annotation not available (184 aa)
   
          0.771
holE
annotation not available (76 aa)
   
          0.768
DJ40_311
Protein of uncharacterised function (DUF2583) (90 aa)
   
          0.762
acrZ
Multidrug efflux pump accessory protein AcrZ; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export (50 aa)
   
          0.755
igaA
annotation not available (715 aa)
   
          0.751
DJ40_2001
Putative lipoprotein (132 aa)
   
          0.734
DJ40_1651
annotation not available (115 aa)
   
          0.730
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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