STRINGSTRING
DJ40_2202 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2202" - Protein of uncharacterised function in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2202Protein of uncharacterised function (DUF2500) (139 aa)    
Predicted Functional Partners:
DJ40_869
Protein of uncharacterised function (DUF1418) (104 aa)
   
          0.737
DJ40_3826
annotation not available (115 aa)
   
          0.725
ybjP
Putative lipoprotein (191 aa)
   
          0.658
DJ40_4082
Lipoprotein (129 aa)
   
          0.613
rcsB_2
annotation not available (196 aa)
   
          0.608
tps_1
annotation not available (806 aa)
   
          0.605
DJ40_398
annotation not available (425 aa)
   
          0.591
DJ40_2625
annotation not available (89 aa)
   
          0.575
DJ40_1515
Lipoprotein (113 aa)
   
          0.561
DJ40_3535
Protein of uncharacterised function (DUF2002) (111 aa)
   
          0.551
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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