STRINGSTRING
dcrB protein (Yersinia pseudotuberculosis) - STRING interaction network
"dcrB" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcrBannotation not available (175 aa)    
Predicted Functional Partners:
DJ40_3662
annotation not available (231 aa)
   
          0.769
pspG
Envelope stress response protein PspG; phageshock_pspG- phage shock protein G (72 aa)
   
          0.757
ygbE
annotation not available (105 aa)
   
          0.743
DJ40_70
annotation not available (278 aa)
   
          0.736
DJ40_1968
Conserved hypothetical protein (103 aa)
   
          0.730
DJ40_799
Fructosamine-3-kinase (297 aa)
   
          0.729
DJ40_1403
Lipoprotein YajG (192 aa)
   
 
      0.721
DJ40_4060
annotation not available (81 aa)
   
          0.710
DJ40_2487
Lipoprotein (239 aa)
   
          0.709
DJ40_4220
annotation not available (184 aa)
   
          0.707
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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