STRINGSTRING
yigL protein (Yersinia pseudotuberculosis) - STRING interaction network
"yigL" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yigLannotation not available (269 aa)    
Predicted Functional Partners:
pldB
annotation not available (331 aa)
 
   
  0.965
ptsG
annotation not available (477 aa)
 
   
  0.715
DJ40_3382
PTS transport protein; EIIB_glc- PTS system, glucose-like IIB component domain protein (103 aa)
         
  0.597
crr
annotation not available (169 aa)
 
     
  0.578
rhtB
annotation not available (206 aa)
              0.524
nagE
PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (677 aa)
 
        0.483
DJ40_2213
annotation not available (393 aa)
   
        0.438
ptsI
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) (575 aa)
 
     
  0.428
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (540 aa)
   
   
  0.420
chbR
annotation not available (276 aa)
         
  0.405
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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