STRINGSTRING
pldB protein (Yersinia pseudotuberculosis) - STRING interaction network
"pldB" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pldBannotation not available (331 aa)    
Predicted Functional Partners:
pldA
annotation not available (292 aa)
   
 
  0.970
yigL
annotation not available (269 aa)
 
   
  0.965
aas
Bifunctional protein Aas; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP- dependent AMP-binding enzyme family (718 aa)
 
  0.930
glpQ
annotation not available (371 aa)
   
 
    0.903
ugpQ
annotation not available (249 aa)
   
 
    0.903
mbtB_1
Pyochelin synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1909 aa)
     
 
  0.660
lasR
annotation not available (245 aa)
           
  0.592
rhtB
annotation not available (206 aa)
              0.516
uspE
annotation not available (318 aa)
   
          0.507
DJ40_3319
Oxidative stress defense protein (259 aa)
   
          0.485
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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