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DJ40_2231 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_2231" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_2231annotation not available (66 aa)    
Predicted Functional Partners:
DJ40_3536
Protein of uncharacterised function (DUF1198) (149 aa)
   
          0.765
DJ40_156
Uncharacterized protein (99 aa)
   
          0.764
DJ40_1017
annotation not available (367 aa)
   
          0.745
csgD
annotation not available (194 aa)
   
          0.731
DJ40_3693
Enhanced serine sensitivity protein SseB; sseB N-terminal domain protein (317 aa)
   
          0.726
DJ40_3577
annotation not available (345 aa)
   
          0.681
pilF
type_IV_pilW- type IV pilus biogenesis/stability protein PilW (249 aa)
   
          0.671
DJ40_3537
annotation not available (110 aa)
   
          0.658
DJ40_917
annotation not available (108 aa)
   
          0.655
DJ40_78
Uncharacterized protein (138 aa)
   
          0.636
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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