STRINGSTRING
mipA protein (Yersinia pseudotuberculosis) - STRING interaction network
"mipA" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mipAannotation not available (256 aa)    
Predicted Functional Partners:
yfeY
RpoE-regulated lipoprotein (203 aa)
   
          0.667
DJ40_61
annotation not available (904 aa)
   
          0.616
DJ40_2113
Lipoprotein (217 aa)
   
          0.587
DJ40_3291
Protein YggN (244 aa)
   
 
      0.544
yhjJ
annotation not available (499 aa)
   
          0.518
igaA
annotation not available (715 aa)
   
          0.495
zapC
Cell division protein ZapC; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ (183 aa)
   
          0.463
DJ40_4220
annotation not available (184 aa)
   
          0.456
DJ40_2471
Putative lipoprotein (112 aa)
   
          0.450
DJ40_1651
annotation not available (115 aa)
   
          0.430
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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