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DJ40_225 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_225" - prkA serine kinase C-terminal domain protein in Yersinia pseudotuberculosis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_225prkA serine kinase C-terminal domain protein (644 aa)    
Predicted Functional Partners:
DJ40_226
UPF0229 protein ERS008480_00952; Belongs to the UPF0229 family (424 aa)
 
   
  0.994
DJ40_232
annotation not available (511 aa)
 
   
  0.984
wrbA
NAD(P)H dehydrogenase (quinone); NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family (199 aa)
     
        0.772
DJ40_3722
Uncharacterized conserved protein (112 aa)
     
        0.753
DJ40_3980
Conserved hypothetical protein (102 aa)
     
        0.737
poxB
annotation not available (573 aa)
     
   
  0.725
osmY
annotation not available (204 aa)
     
   
  0.714
yqjC
annotation not available (126 aa)
     
        0.675
DJ40_2998
annotation not available (135 aa)
     
        0.666
DJ40_2997
annotation not available (87 aa)
     
        0.666
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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