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fipA protein (Yersinia pseudotuberculosis) - STRING interaction network
"fipA" - Thioredoxin: thioredoxin in Yersinia pseudotuberculosis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fipAThioredoxin- thioredoxin; Belongs to the thioredoxin family (108 aa)    
Predicted Functional Partners:
trxB
TRX_reduct- thioredoxin-disulfide reductase; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (320 aa)
 
 
  0.992
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (419 aa)
 
   
  0.869
gltB
annotation not available (1485 aa)
       
      0.849
trxC
Thioredoxin- thioredoxin (145 aa)
 
     
0.794
dnaK
Chaperone protein DnaK; Acts as a chaperone (636 aa)
 
 
  0.773
bcp
annotation not available (156 aa)
     
 
  0.647
gppA
Guanosine-5’-triphosphate,3’-diphosphate pyrophosphatase; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the "stringent response", an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities (497 aa)
   
   
  0.643
galE
UDP-galactose-4-epimerase; galE- UDP-glucose 4-epimerase GalE (338 aa)
   
     
  0.640
rhlB
ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA; Belongs to the DEAD box helicase family. RhlB subfamily (428 aa)
   
        0.628
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite; Belongs to the PAPS reductase family. CysH subfamily (244 aa)
       
 
  0.621
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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