STRINGSTRING
colE7 protein (Yersinia pseudotuberculosis) - STRING interaction network
"colE7" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
colE7annotation not available (469 aa)    
Predicted Functional Partners:
imm
annotation not available (84 aa)
 
 
      0.962
DJ40_3292
annotation not available (3103 aa)
   
          0.693
DJ40_3361
Conserved hypothetical protein (512 aa)
 
          0.675
DJ40_2213
annotation not available (393 aa)
   
          0.671
DJ40_4202
annotation not available (387 aa)
   
          0.664
DJ40_240
annotation not available (390 aa)
   
          0.662
shlA
annotation not available (1423 aa)
 
        0.653
DJ40_717
Conserved hypothetical protein (410 aa)
 
          0.651
argO
Arginine exporter protein ArgO; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine (205 aa)
     
   
  0.646
DJ40_3259
Uncharacterized protein (410 aa)
 
          0.636
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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