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hdfR protein (Yersinia pseudotuberculosis) - STRING interaction network
"hdfR" - HTH-type transcriptional regulator HdfR in Yersinia pseudotuberculosis
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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hdfRHTH-type transcriptional regulator HdfR; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon (293 aa)    
Predicted Functional Partners:
yifE
Protein yifE (112 aa)
              0.698
seqA
Negative modulator of initiation of replication; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated (175 aa)
           
  0.650
argR
Arginine repressor; Regulates arginine biosynthesis genes (156 aa)
           
  0.592
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (635 aa)
           
  0.590
lysR
annotation not available (313 aa)
   
   
  0.520
rob
annotation not available (288 aa)
   
   
  0.509
DJ40_2933
annotation not available (94 aa)
   
          0.485
rseC
annotation not available (151 aa)
   
        0.478
gcvA
annotation not available (305 aa)
   
          0.466
dmlR_3
annotation not available (303 aa)
   
        0.450
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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