STRINGSTRING
ytfT protein (Yersinia pseudotuberculosis) - STRING interaction network
"ytfT" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfTannotation not available (332 aa)    
Predicted Functional Partners:
araG_3
Putative sugar transport system ATP-binding protein; ccmA- heme ABC exporter, ATP-binding protein CcmA (493 aa)
        0.945
yjfF
annotation not available (330 aa)
 
     
0.927
ytfQ
annotation not available (318 aa)
        0.923
xylG
Xylose import ATP-binding protein XylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family (510 aa)
        0.534
araG
Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family (523 aa)
        0.515
rbsB_5
annotation not available (319 aa)
 
        0.493
araG_4
annotation not available (504 aa)
        0.456
xylF
xylF- D-xylose ABC transporter, D-xylose-binding protein (331 aa)
          0.446
mglA_3
annotation not available (499 aa)
        0.432
mglA5
annotation not available (525 aa)
        0.418
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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