STRINGSTRING
ytfQ protein (Yersinia pseudotuberculosis) - STRING interaction network
"ytfQ" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfQannotation not available (318 aa)    
Predicted Functional Partners:
ytfT
annotation not available (332 aa)
        0.923
yjfF
annotation not available (330 aa)
        0.922
araG_3
Putative sugar transport system ATP-binding protein; ccmA- heme ABC exporter, ATP-binding protein CcmA (493 aa)
 
      0.909
hisB
annotation not available (355 aa)
           
  0.594
holD
DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The exact function of the psi subunit is unknown (145 aa)
           
  0.592
xylH
annotation not available (394 aa)
          0.520
barA
annotation not available (939 aa)
     
 
  0.417
arcB
annotation not available (778 aa)
 
   
 
  0.410
torS
annotation not available (939 aa)
 
   
 
  0.410
araH
annotation not available (302 aa)
        0.407
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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